π¬ Inferring Biological Networks
π₯ from Claudia Solis-Lemus, Wisconsin Institutes for Discovery, UW-Madison
π Watch
π²Channel: @Bioinformatics
#video #network
π₯ from Claudia Solis-Lemus, Wisconsin Institutes for Discovery, UW-Madison
π Watch
π²Channel: @Bioinformatics
#video #network
YouTube
Claudia Solis-Lemus: Inferring Biological Networks
UW-Madison, Wisconsin Evolution, Evolution Seminar Series
https://evolution.wisc.edu/seminars/seminars-info/
https://evolution.wisc.edu
Claudia Solis-Lemus, Assistant Professor, Department of Plant Pathology and Wisconsin Institutes for Discovery, UW-Madisonβ¦
https://evolution.wisc.edu/seminars/seminars-info/
https://evolution.wisc.edu
Claudia Solis-Lemus, Assistant Professor, Department of Plant Pathology and Wisconsin Institutes for Discovery, UW-Madisonβ¦
π2π₯1
π Demystifying the black box: A survey on explainable artificial intelligence (XAI) in bioinformatics
π Journal: Computational and Structural Biotechnology Journal (I.F.=4.5)
π Publish year: 2025
π§βπ»Authors: Aishwarya Budhkar, Qianqian Song, Jing Su, ...
π’Universities: Indiana University Bloomington - University of Florida - Indiana University, USA
π Study the paper
π²Channel: @Bioinformatics
#review #explainability #ai
π Journal: Computational and Structural Biotechnology Journal (I.F.=4.5)
π Publish year: 2025
π§βπ»Authors: Aishwarya Budhkar, Qianqian Song, Jing Su, ...
π’Universities: Indiana University Bloomington - University of Florida - Indiana University, USA
π Study the paper
π²Channel: @Bioinformatics
#review #explainability #ai
π ABI Bioinformatics Guide
π₯ Free online book by Armenian Bioinformatics Institute, 2024
π Study
π²Channel: @Bioinformatics
#book
π₯ Free online book by Armenian Bioinformatics Institute, 2024
π Study
π²Channel: @Bioinformatics
#book
β€4
π Deep Generative Models for Therapeutic Peptide Discovery: A Comprehensive Review
π Journal: ACM Computing Surveys (π₯I.F.=23.8)
π Publish year: 2025
π§βπ»Authors: Leshan Lai, Yuansheng Liu, Bosheng Song, ...
π’Universities: Hunan University, China - State University of New York, USA
π Study the paper
π²Channel: @Bioinformatics
#review #llm #peptide #therapeutic
π Journal: ACM Computing Surveys (π₯I.F.=23.8)
π Publish year: 2025
π§βπ»Authors: Leshan Lai, Yuansheng Liu, Bosheng Song, ...
π’Universities: Hunan University, China - State University of New York, USA
π Study the paper
π²Channel: @Bioinformatics
#review #llm #peptide #therapeutic
π1
π½ Gene expression β An introduction and hands on experience on data analysis
π Watch
π²Channel: @Bioinformatics
#video #gene_expression
π Watch
π²Channel: @Bioinformatics
#video #gene_expression
YouTube
Gene expression β An introduction and hands on experience on data analysis
by
Prof. Meiyappan / IITM
Prof. Meiyappan / IITM
β€1π1
π Perspectives on Computational Enzyme Modeling: From Mechanisms to Design and Drug Development
π Journal: ACS Omega (I.F.=3.7)
π Publish year: 2024
π§βπ»Authors: Kwangho Nam, Yihan ShaoDan, T. Major, ...
π’Universities:
University of Texas at Arlington-University of Oklahoma, USA
UmeΓ₯ University, Swedn
π Study the paper
π²Channel: @Bioinformatics
#review #enzyme #drug
π Journal: ACS Omega (I.F.=3.7)
π Publish year: 2024
π§βπ»Authors: Kwangho Nam, Yihan ShaoDan, T. Major, ...
π’Universities:
University of Texas at Arlington-University of Oklahoma, USA
UmeΓ₯ University, Swedn
π Study the paper
π²Channel: @Bioinformatics
#review #enzyme #drug
π¬ Decomposing protein and genomic language models to understand what they are learning
πΉ Watch
π²Channel: @Bioinformatics
#video #protein #genomics
πΉ Watch
π²Channel: @Bioinformatics
#video #protein #genomics
YouTube
MLCB 2024: Sergey Ovchinnikov (MIT) Decomposing protein and genomic language models to understand...
MLCB 2024: Sergey Ovchinnikov (MIT)
Decomposing protein and genomic language models to understand what they are learning
Decomposing protein and genomic language models to understand what they are learning
1
π Quantifying transcriptome diversity: a review
π Journal: Briefings in Functional Genomics (I.F.=2.5)
π Publish year: 2024
π§βπ»Authors: Emma F Jones, Anisha Haldar, Vishal H Oza, ...
π’Universities: The University of Alabama at Birmingham, USA
π Study the paper
π²Channel: @Bioinformatics
#review #transcriptome
π Journal: Briefings in Functional Genomics (I.F.=2.5)
π Publish year: 2024
π§βπ»Authors: Emma F Jones, Anisha Haldar, Vishal H Oza, ...
π’Universities: The University of Alabama at Birmingham, USA
π Study the paper
π²Channel: @Bioinformatics
#review #transcriptome
β€1
π Using genomic data and machine learning to predict antibiotic resistance: A tutorial paper
π Journal: PLOS Computational Biology (I.F.=3.8)
π Publish year: 2025
π§βπ»Authors: Faye Orcales ,Lucy Moctezuma Tan ,Meris Johnson-Hagler, ...
π’Universities: University of California San Francisco - San Francisco State University, USA
π Study the paper
π²Channel: @Bioinformatics
#tutorial #genomic #antibiotic
π Journal: PLOS Computational Biology (I.F.=3.8)
π Publish year: 2025
π§βπ»Authors: Faye Orcales ,Lucy Moctezuma Tan ,Meris Johnson-Hagler, ...
π’Universities: University of California San Francisco - San Francisco State University, USA
π Study the paper
π²Channel: @Bioinformatics
#tutorial #genomic #antibiotic
β€3
πComprehensive Evaluation of Multi-Omics Clustering Algorithms for Cancer Molecular Subtyping
π Journal: International Journal of Molecular Sciences (I.F.=4.9)
π Publish year: 2025
π§βπ»Authors: Juan Wang,Lingxiao Wang,Yi Liu, ...
π’Universities: Anhui Medical University-Beijing Institute of Lifeomics, China
π Study the paper
π²Channel: @Bioinformatics
#review #omics #clustering #cancer #subtyping
π Journal: International Journal of Molecular Sciences (I.F.=4.9)
π Publish year: 2025
π§βπ»Authors: Juan Wang,Lingxiao Wang,Yi Liu, ...
π’Universities: Anhui Medical University-Beijing Institute of Lifeomics, China
π Study the paper
π²Channel: @Bioinformatics
#review #omics #clustering #cancer #subtyping
β€1π1
π₯ Code to Cure: AI and the Future of Health
π Watch
π²Channel: @Bioinformatics
#video #ai #health
π Watch
π²Channel: @Bioinformatics
#video #ai #health
YouTube
Code to Cure: AI and the Future of Health
Renowned computer scientist and Coursera co-founder Daphne Koller joins Brian Greene to discuss her new venture in using machine learning for drug discovery and development.
This program is part of the Big Ideas series, supported by the John Templeton Foundation.β¦
This program is part of the Big Ideas series, supported by the John Templeton Foundation.β¦
πMolecule generation for drug design: A graph learning perspective
π Journal: Fundamental Research (I.F.=5.7)
π Publish year: 2024
π§βπ»Authors: Nianzu Yang, Huaijin Wu, Kaipeng Zeng, ...
π’Universities: Shanghai Jiao Tong University, China
π Study the paper
π²Channel: @Bioinformatics
#review #molecule #drug #graph
π Journal: Fundamental Research (I.F.=5.7)
π Publish year: 2024
π§βπ»Authors: Nianzu Yang, Huaijin Wu, Kaipeng Zeng, ...
π’Universities: Shanghai Jiao Tong University, China
π Study the paper
π²Channel: @Bioinformatics
#review #molecule #drug #graph
β€2
πMachine learning and related approaches in transcriptomics
π Journal: Biochemical and Biophysical Research Communications (I.F.=2.5)
π Publish year: 2024
π§βπ»Authors: Yuning Cheng, Si-Mei Xu, Kristina Santucci, ...
π’Universities: University of New South Wales, Australia
π Study the paper
π²Channel: @Bioinformatics
#review #machine_learning #transcriptomics
π Journal: Biochemical and Biophysical Research Communications (I.F.=2.5)
π Publish year: 2024
π§βπ»Authors: Yuning Cheng, Si-Mei Xu, Kristina Santucci, ...
π’Universities: University of New South Wales, Australia
π Study the paper
π²Channel: @Bioinformatics
#review #machine_learning #transcriptomics
β€1
π¨βπ» Faculty Member (Bioinformatics)
π Bioengineering Department - KFUPM
πΈπ¦Dhahran, Eastern, Saudi Arabia
π₯King Fahd University of Petroleum & Minerals (KFUPM) invites applications for Assistant/Associate/Full Professor positions in the field of Bioinformatics. We seek outstanding candidates with a strong background in Biology and Computer Science to join our dynamic and interdisciplinary faculty team.
β Responsibilities:
- Conduct cutting-edge research in bioinformatics and related areas.
- Teach undergraduate and graduate courses in bioinformatics, biology, and computer science.
- Mentor students and contribute to curriculum development.
- Secure research funding and engage in collaborative projects.
β Qualifications:
- Ph.D. in Bioinformatics, Bioengineering, Biology, Computer Science, or a closely related field.
- Strong publication record and research achievements.
- Proven teaching experience and mentorship experience for associate and full professor candidates.
- Experience in interdisciplinary collaboration is a plus.
- Preference is given to the following area of expertise: Bioinformatics, Biomarkers Discovery, Biologics Design, Personalized Medicine, A.I in Medicine. Candidates with background and/or degree in biology. And background and/or in computer science
π§ Please send your CV and a cover letter\email expressing your interest, to:
Dr. Yaqub Mahnashi, Bioengineering Chairman at Email: [email protected]
Dr. Ahmed S. Dalaq, Assistant Professor, at Email: [email protected]
βοΈ Potential applicants will be contacted if more documents are needed for screening.
π²Channel: @Bioinformatics
#job #faculty_position #saudi_arabia
π Bioengineering Department - KFUPM
πΈπ¦Dhahran, Eastern, Saudi Arabia
π₯King Fahd University of Petroleum & Minerals (KFUPM) invites applications for Assistant/Associate/Full Professor positions in the field of Bioinformatics. We seek outstanding candidates with a strong background in Biology and Computer Science to join our dynamic and interdisciplinary faculty team.
β Responsibilities:
- Conduct cutting-edge research in bioinformatics and related areas.
- Teach undergraduate and graduate courses in bioinformatics, biology, and computer science.
- Mentor students and contribute to curriculum development.
- Secure research funding and engage in collaborative projects.
β Qualifications:
- Ph.D. in Bioinformatics, Bioengineering, Biology, Computer Science, or a closely related field.
- Strong publication record and research achievements.
- Proven teaching experience and mentorship experience for associate and full professor candidates.
- Experience in interdisciplinary collaboration is a plus.
- Preference is given to the following area of expertise: Bioinformatics, Biomarkers Discovery, Biologics Design, Personalized Medicine, A.I in Medicine. Candidates with background and/or degree in biology. And background and/or in computer science
π§ Please send your CV and a cover letter\email expressing your interest, to:
Dr. Yaqub Mahnashi, Bioengineering Chairman at Email: [email protected]
Dr. Ahmed S. Dalaq, Assistant Professor, at Email: [email protected]
βοΈ Potential applicants will be contacted if more documents are needed for screening.
π²Channel: @Bioinformatics
#job #faculty_position #saudi_arabia
β€4
π½ The Integrative Power of MULTIOMICS In Pursuit of Novel Insights and Discoveries
π Watch
π²Channel: @Bioinformatics
#video #multiomics #metabolomics
π Watch
π²Channel: @Bioinformatics
#video #multiomics #metabolomics
YouTube
The Integrative Power of MULTIOMICS In Pursuit of Novel Insights and Discoveries
Multiomics research is crucial for understanding complex biological systems at a comprehensive level. By integrating data from genomics, transcriptomics, proteomics, metabolomics, and other omics disciplines, researchers can unravel intricate interactionsβ¦
β€1
π New methods for drug synergy prediction: A mini-review
π Journal: Current Opinion in Structural Biology (I.F.=6.1)
π Publish year: 2024
π§βπ»Authors: Fatemeh Abbasi, Juho Rousu
π’Universities: University of Tehran, Iran - Aalto University, Finland
π Study the paper
π²Channel: @Bioinformatics
#review #drug
π Journal: Current Opinion in Structural Biology (I.F.=6.1)
π Publish year: 2024
π§βπ»Authors: Fatemeh Abbasi, Juho Rousu
π’Universities: University of Tehran, Iran - Aalto University, Finland
π Study the paper
π²Channel: @Bioinformatics
#review #drug
π₯1
πΉ Making sense of gene and protein lists with functional enrichment analysis
π₯ from Australian BioCommons
π Watch
π²Channel: @Bioinformatics
#video #gene #protein #enrichment_analysis
π₯ from Australian BioCommons
π Watch
π²Channel: @Bioinformatics
#video #gene #protein #enrichment_analysis
YouTube
Making sense of gene and protein lists with functional enrichment analysis
Do you have a long list of genes or proteins from omics experiments that you donβt know what to do with? This webinar explains how functional enrichment analysis can be used to understand what these lists mean by employing gene ontology and pathway informationβ¦
β€1