Bioinformatics
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Bioinformatics, Computational Biology & Systems Biology

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Bioinformatics
16.9K subscribers
Bioinformatics
📄 Application of Deep Learning on Single-Cell RNA Sequencing Data Analysis: A Review

📘Journal: Genomics, Proteomics and Bioinformatics (I.F.= 9.5)
🗓 Publish year: 2022

🧑‍💻Authors: Matthew Brendel, Chang Su, Zilong Bai, ...
🏢University: Cornell University - Temple University, USA

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#review #deep_learning #single_cell #rna
👍8❤3👏1💯1
4.44K views
Bioinformatics
📑 Single-Cell Analysis in the Omics Era: Technologies and Applications in Cancer

📔Journal: Genes (I.F.=3.5)
🗓Publish year: 2023

🧑‍💻Authors: Michele Massimino,Federica Martorana,Stefania Stella, ...
🏢University: University of Catania - University Oncology Department, Italy

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#review #single_cell
👍4
4.72K views
Bioinformatics
🎥 A Deeper Dive into Single-Cell RNA Sequencing Foundation Models

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#video #single_cell
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Rebecca Boiarsky - A Deeper Dive into Single Cell RNA Sequencing Foundation Models
Enjoy the videos and music you love, upload original content, and share it all with friends, family, and the world on YouTube.
👍1
3.79K views
Bioinformatics
📑 Interpretable deep learning in single-cell omics

🗓Publish year: 2024

🧑‍💻Authors: Manoj M Wagle, Siqu Long, Carissa Chen, ...
🏢University: The University of Sydney, Australia

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#review #deep_learning #single_cell
❤2👍1👏1
4.2K views
Bioinformatics
📄 A Survey on Methods for Predicting Polyadenylation Sites from DNA Sequences, Bulk RNA-Seq, and Single-Cell RNA-Seq

📕Journal: Genomics, Proteomics & Bioinformatics (GPB) (I.F.=9.5)
🗓Publish year: 2022

🧑‍💻Authors: Wenbin Ye, Qiwei Lian, Congting Ye, Xiaohui Wu
🏢University: Soochow University - Xiamen University, China

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#review #Polyadenylation #RNA_Seq #Single_Cell
👍5❤4👌1
4.51K viewsedited  
Bioinformatics
📄 A review of the current state of single-cell proteomics and future perspective

📕Journal: Analytical and Bioanalytical Chemistry (I.F.=4.3)
🗓Publish year: 2023

🧑‍💻Authors: Rushdy Ahmad & Bogdan Budnik
🏢University: Harvard University, USA

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#review #single_cell #proteomics
4.53K viewsedited  
Bioinformatics
📄Deep learning applications in single-cell genomics and transcriptomics data analysis

📘Journal: Biomedicine & Pharmacotherapy (I.F.=6.9)
🗓Publish year: 2023

🧑‍💻Authors: Nafiseh Erfanian, A. Ali Heydari, Adib Miraki Feriz,...
🏢University: Birjand University of Medical Sciences, Iran - University of California, Merced, USA - University of Calgary, Calgary, Canada, ...

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#review #deep_learning #single_cell #genomics #transcriptomics
👍6❤2👌1
4.86K viewsedited  
Bioinformatics
📃 Single-cell classification, analysis, and its application using deep learning techniques

📔Journal: BioSystems (I.F.=2)
🗓Publish year: 2024

🧑‍💻Authors: R. Premkumar, Arthi Srinivasan, K.G. Harini Devi,...
🏢University: Rajalakshmi Engineering College, Chennai, India - University Malaysia Pahang (UMP), Malaysia - Malaysia, ...

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#review #single_cell #deep_learning
❤6👍4
5.44K views
Bioinformatics
📚 Single-Cell RNA Sequencing Analysis: A Step-by-Step Overview
💥Book chapter from Springer

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📲Channel: @Bioinformatics
#bookchapter #single_cell #rna_seq
👍8❤4🔥3👏2
5.93K views
Bioinformatics
🎞 Introduction to Single Cell Genomics
💥From Minnesota Supercomputing Institute

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#video #single_cell #genomics
YouTube
Intro to Single Cell Genomics Oct 2024
Topic: Intro to Single Cell Genomics
Presented by: RI Bioinformatics
Date: Oct 22 2024

Learn more at https://www.msi.umn.edu
❤11👍1
5.87K views
Bioinformatics
📃 Bioinformatics perspectives on transcriptomics: A comprehensive review of bulk and single-cell RNA sequencing analyses

📘 Journal: Quantitative Biology (I.F.=0.6)
🗓Publish year: 2025

🧑‍💻Authors: Jorge A. Tzec-Interián, Daianna González-Padilla, Elsa B. Góngora-Castillo
🏢Universities: Yucatan Scientific Research Center, Mexico

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#review #transcriptomics #rna #single_cell
❤4👏2
3.86K views
Bioinformatics
📹 Single Cell RNA-Seq Analysis in R

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Single Cell RNA-Seq Analysis in R With Seurat|ScRNA-seq Analysis Seurat|Bioinformatics for Beginners
Single-cell RNA sequencing (scRNA-seq) analysis in R using Seurat is a powerful method for studying gene expression at the individual cell level, enabling researchers to explore cellular heterogeneity and identify distinct cell populations.
In this bioinformatics…
❤8👍3👏1
3.88K views
Bioinformatics
📄A Systematic Overview of Single-Cell Transcriptomics Databases, their Use cases, and Limitations

🗓 Publish year: 2024

🧑‍💻Authors: Mahnoor N. Gondal, Saad Ur Rehman Shah, Arul M. Chinnaiyan, ...
🏢Universities: University of Michigan - University of Illinois Business College, USA

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#review #single_cell #transcriptomics
👍4❤2🙏1
4.07K views
Bioinformatics
📃 Biological Multi-Layer and Single Cell Network-Based Multiomics Models - a Review

🗓 Publish year: 2025

🧑‍💻Authors: Marcello Barylli, Joyaditya Saha, Tineke E. Buffart , ...
🏢Universities: University of Amsterdam - Amsterdam University Medical Centers - Oncode Institute, Netherlands

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#review #multiomics #network #multi_layer #single_cell
👍2
3.78K views
Bioinformatics
📄Graph neural networks for single-cell omics data: a review of approaches and applications

📙 Journal: Briefings in Bioinformatics (I.F.=6.8)
🗓 Publish year: 2025

🧑‍💻Authors: Sijie Li, Heyang Hua, Shengquan Chen
🏢Universities: Nankai University, China

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#review #gnn #single_cell #omic
🙏4👍1
3.98K views
Bioinformatics
📹 Single-Cell Analysis without coding!

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#video #single_cell #drug
YouTube
Accelerate Data-to-Insight: Code-Free Single-Cell Analysis for Modern Drug Development
Explore how our cutting-edge, code-free single cell data analysis software, CeleLens Cloud, as well as our comprehensive single cell sequencing database, SynEcoSys, can revolutionize drug discovery and development in biotech and pharma.

This session will…
3.43K views
Bioinformatics
📽 Unlocking Single-Cell Secrets

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#video #single_cell #rna
YouTube
Unlocking Single-Cell Secrets: A Beginner's... - Veschetti, Treccani, Malerba - ISCBacademy Tutorial
March 20, 2025 at 9:00 AM EST - Unlocking Single-Cell Secrets: A Beginner's Workshop on Single-Cell RNA Sequencing Analysis Using Seurat in R/RStudio by Laura Veschetti, Mirko Treccani, Giovanni Malerba - Hosted by ISCB - ISCBacademy Tutorial
👍4❤1👏1👌1
3.48K views
Bioinformatics
📃 Mapping Cell Atlases at the Single-Cell Level

📗 Journal: Advanced Science (I.F.=14.1)
🗓Publish year: 2025

🧑‍💻Authors: Fang Ye, Jingjing Wang, Jiaqi Li, , ...
🏢Universities: Zhejiang University School of Medicine & ZhejiangUniversity, China

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#review #single_cell #cell #atlas
👍4❤2
6.13K views