Bioinformatics
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Bioinformatics, Computational Biology & Systems Biology

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❓Top answers to the question:
How should one start to learn computational biology?

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πŸ“²Channel: @Bioinformatics

#computational_biology #question
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πŸ“– A Primer for Computational Biology
πŸ’₯ Free Ebook from Oregon State University

🌐 Study

πŸ“²Channel: @Bioinformatics
#book #computational_biology
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πŸ“ƒA comprehensive survey on computational learning methods for analysis of gene expression data

πŸ“˜Journal: Frontiers in Molecular Biosciences (I.F.=6.113)
πŸ—“Publish year: 2022

πŸ“Ž Study the paper

πŸ“²Channel: @Bioinformatics
#review #gene_expression #computational
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πŸ“„The five pillars of computational reproducibility: bioinformatics and beyond

πŸ“˜ Journal: Briefings in Bioinformatics (I.F.= 9.5)
πŸ—“ Publish year: 2023

πŸ§‘β€πŸ’»Authors: Mark Ziemann, Pierre Poulain, Anusuiya Bora
🏒University: Deakin University, Australia - Université Paris Cité, France

πŸ“Ž Study the paper

πŸ“²Channel: @Bioinformatics
#review #computational_research #best_practice
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🎞 Machine Learning with Graphs: Graph Neural Networks in Computational Biology

πŸ’₯Free recorded course by Prof. Marinka Zitnik

πŸ’₯In this lecture, Prof. Marinka gives an overview of why graph learning techniques can greatly help with computational biology research. Concretely, this talk covers 3 exemplar use cases: (1) Discovering safe drug-drug combinations via multi-relational link prediction on heterogenous knowledge graphs; (2) Classify patient outcomes and diseases via learning subgraph embeddings; and (3) Learning effective disease treatments through few-shot learning for graphs.

πŸ“½ Watch

πŸ“²Channel: @ComplexNetworkAnalysis

#video #course #Graph #GNN #Machine_Learning #computational_biology
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πŸ“ƒConnecting the dots: Computational network analysis for disease insight and drug repurposing

πŸ—“ Publish year: 2024
πŸ“˜Journal: Current Opinion in Structural Biology (COSB) (I.F=6.1)

πŸ§‘β€πŸ’»Authors: Nicoleta Siminea, Eugen Czeizler, Victor-Bogdan Popescu, Ion Petre and Andrei Paun
🏒Universities: University of Bucharest, Romania
University of Helsinki, Finland


πŸ“Ž Study paper

πŸ“±Channel: @ComplexNetworkAnalysis
#paper #Connecting #Computational #disease #drug #repurposing
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