Scientific Programming
@scientific_programming
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446 links
Tutorials and applications from scientific programming

https://github.com/Ziaeemehr
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Scientific Programming
160 subscribers
Scientific Programming
Computational neuroscience resources
On this page is a list of resources for learning computational neuroscience that are freely available online.
#resources
#computational_neuroscience
@scientific_programming
110 viewsZiAEE, edited  
Scientific Programming
introduction_hdf5.pdf
36 KB
ذخیره داده ها با استفاده از کتابخانه hdf5 در julia
#julia
#hdf5
@scientific_programming
82 viewsZiAEE, edited  
Scientific Programming
read_in_py.py
260 B
خواندن فایل hdf5 در پایتون
#hdf5
#python
@scienctific_programming
82 viewsZiAEE, edited  
Scientific Programming
🔆🔆 WHAT IS HDF5?
HDF5 is a unique technology suite that makes possible the management of extremely large and complex data collections.
The HDF5 technology suite includes:

☘️ A versatile data model that can represent very complex data objects and a wide variety of metadata.
☘️ A completely portable file format with no limit on the number or size of data objects in the collection.
☘️ A software library that runs on a range of computational platforms, from laptops to massively parallel systems, and implements a high-level API with C, C++, Fortran 90, Java, Julia and Python interfaces.
☘️ A rich set of integrated performance features that allow for access time and storage space optimizations.
Tools and applications for managing, manipulating, viewing, and analyzing the data in the collection.

در قالب h5 میشه داده ها رو به صورت سلسله مراتبی ذخیره کرد. بنابراین محدودیتی برای ذخیره نوع فایل وجود نداره. در یک فایل میتونید ترکیبی از صوت، تصویر و متن رو به صورت باینری و با سرعت بالای خواندن و نوشتن ذخیره کنید. همچنین نگرانی ای بابت خواندن فایل در محیط های مختلف و زبان های برنامه نویسی مختلف هم وجود نداره. میشه فایل رو مثلا در سی پلاس یا جولیا نوشت و در پایتون خواند یا هر ترکیب دلخواه دیگه.
ورژن های مختلف کتابخانه ها با ورژن های قبلی سازگارند و فایل های قدیمی همچنان قابل خواندن هستند. مثال های بیشتر در اینجا در دسترس اند.

Read more
#hdf5
#python
#IO

@scientific_programming
GitHub
Ziaeemehr/workshop_scripting
Scientific programming toolbox with python. Contribute to Ziaeemehr/workshop_scripting development by creating an account on GitHub.
95 viewsZiAEE, edited  
Scientific Programming
HDF5 with Python
#hdf5
#python
#IO
@scientific_programming
YouTube
1/10- HDF5 with Python: Course Introduction
Visit my personal web-page for the Python code:
https://www.softlight.tech/
93 viewsZiAEE, 
Scientific Programming
آیا افزایش آمار روزانه مبتلایان به دلیل افزایش ظرفیت تست های روزانه است؟ یا موج دوم؟
داده ها در گیت هاب در دست رس است.
#covid19
#python
GITHUB
82 viewsZiAEE, edited  
Scientific Programming
Computational Neuroscience
#coursera
#computational
#neuroscience
@scientific_programming
Coursera
Computational Neuroscience
Offered by University of Washington. This course ... Enroll for free.
86 viewsZiAEE, 
Scientific Programming
SciencePlots: Matplotlib styles for scientific plotting
SciencePlots
#python
#matplotlib
@scientific_programming
84 viewsZiAEE, edited  
Scientific Programming
NEST Conference 2020: A Virtual Forum for Users and Developers


10 June 2020 — Deadline for NEST Initiative membership application
22 June 2020 — Registration deadline
#conference

@scientific_programming
98 viewsZiAEE, edited  
Scientific Programming
Scientific Programming
Computational Neuroscience #coursera #computational #neuroscience @scientific_programming
The repository of the course in GitHub.
GitHub
GitHub - computational-neuroscience/Computational-Neuroscience-UW: Python scripts that supplement the Coursera Computational Neuroscience…
Python scripts that supplement the Coursera Computational Neuroscience course by the University of Washington - computational-neuroscience/Computational-Neuroscience-UW
140 viewsZiAEE, 
Scientific Programming
Python quick tutorial

#beginner
#python
#numpy
@scientific_programming
cs231n.github.io
Python Numpy Tutorial (with Jupyter and Colab)
Course materials and notes for Stanford class CS231n: Deep Learning for Computer Vision.
114 viewsZiAEE, 
Scientific Programming
Optimization of Scientific Code with Cython: Ising Model
#cython
@scientific_programming
jakevdp.github.io
Optimization of Scientific Code with Cython: Ising Model | Pythonic Perambulations
114 viewsZiAEE, edited  
Scientific Programming
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VIEW IN TELEGRAM
131 viewsZiAEE, edited  
Scientific Programming
Scientific Programming
The Elements of Statistical Learning https://web.stanford.edu/~hastie/Papers/ESLII.pdf #learning #book @scientific_programming
Github repository in Python.
#ML
#python
@scientific_programming
GitHub
GitHub - empathy87/The-Elements-of-Statistical-Learning-Python-Notebooks: A series of Python Jupyter notebooks that help you better…
A series of Python Jupyter notebooks that help you better understand "The Elements of Statistical Learning" book - empathy87/The-Elements-of-Statistical-Learning-Python-Notebooks
114 viewsZiAEE, edited  
Scientific Programming
خورشید گرفتگی را به صورت آنلاین مشاهده کنید.
رصدخانه هلیا - دانشگاه تحصیلات تکمیلی زنجان
https://www.aparat.com/heliya_observatory/live
Heliya_observatory - آپارات
پخش زنده رویداد های انجمن
199 viewsZiAEE, edited  
Scientific Programming
Speed up Numpy and Pandas with NumExpr package

#python
#numpy
#numexpr
@scientific_programming
Medium
Speed up your Numpy and Pandas with NumExpr package
We show how to significantly speed up your mathematical calculations in Numpy and Pandas using a small library.
203 viewsZiAEE, edited  
Scientific Programming
KCNI Virtual Summer School

ChrowdCast Link:
https://www.crowdcast.io/e/s4qmka1v/1
Password for the Session:
Neuroinformatics
GitHup
crowdcast
Krembil Centre for Neuroinformatics Summer School 2020
Register now for Krembil Centre for Neuroinformatics Summer School 2020 on crowdcast, scheduled to go live on July 6, 2020, 10:45 AM EDT.
202 viewsZiAEE, 
Scientific Programming
Scientific Programming
KCNI Virtual Summer School ChrowdCast Link: https://www.crowdcast.io/e/s4qmka1v/1 Password for the Session: Neuroinformatics GitHup
The school just started!
163 viewsZiAEE, 
Scientific Programming
Second week is running.
Check twitter : @neuromatch for updates.
https://github.com/NeuromatchAcademy/course-content/tree/master/tutorials
GitHub
course-content/tutorials at main · NeuromatchAcademy/course-content
NMA Computational Neuroscience course. Contribute to NeuromatchAcademy/course-content development by creating an account on GitHub.
95 viewsZiAEE, 
Scientific Programming
The Information Dynamics Toolkit xl (IDTxl) is a comprehensive software package for efficient inference of networks and their node dynamics from multivariate time series data using information theory. IDTxl provides functionality to estimate the following measures:

For network inference:
🌱multivariate transfer entropy (TE)/Granger causality (GC)
🌱 multivariate mutual information (MI)
🌱 bivariate TE/GC
🌱 bivariate MI

For analysis of node dynamics:
🌱 active information storage (AIS)
🌱partial information decomposition (PID)

https://github.com/pwollstadt/IDTxl

#information_theory
#network_inference
#transfer_entropy
#python
GitHub
GitHub - pwollstadt/IDTxl: The Information Dynamics Toolkit xl (IDTxl) is a comprehensive software package for efficient inference…
The Information Dynamics Toolkit xl (IDTxl) is a comprehensive software package for efficient inference of networks and their node dynamics from multivariate time series data using information theo...
153 viewsZiAEE, edited  
Scientific Programming
2020 Schedule | Neurohack Years | Neurohackademy
https://neurohackademy.org/neurohack_year/2020/
لینک یوتیوب کورس ها بعد از برگزاری هر جلسه به برنامه زمانی اضافه می شود.
116 viewsZiAEE, edited