Network Analysis Resources & Updates
3.09K subscribers
827 photos
163 files
1.14K links
Are you seeking assistance or eager to collaborate?
Don't hesitate to dispatch your insights, inquiries, proposals, promotions, bulletins, announcements, and more to our channel overseer. We're all ears!

Contact: @Questioner2
Download Telegram
Forwarded from Bioinformatics
πŸ“‘ Enhancing Molecular Network-Based Cancer Driver Gene Prediction Using Machine Learning Approaches: Current Challenges and Opportunities

πŸ““ Journal: Journal of Cellular and Molecular Medicine (I.F.=4.3)
πŸ—“Publish year: 2025

πŸ§‘β€πŸ’»Authors: Hao Zhang, Chaohuan Lin, Ying'ao Chen, ...
🏒Universities: Wenzhou Medical University - University of Chinese Academy of Sciences, China

πŸ“Ž Study the paper

πŸ“²Channel: @Bioinformatics
#review #cancer #network #driver_gene #machine_learning
🎞 Machine Learning with Graphs: design space of graph neural networks

πŸ’₯Free recorded course by Prof. Jure Leskovec

πŸ’₯ This part discussed the important topic of GNN architecture design. Here, we introduce 3 key aspects in GNN design: (1) a general GNN design space, which includes intra-layer design, inter-layer design and learning configurations; (2) a GNN task space with similarity metrics so that we can characterize different GNN tasks and, therefore, transfer the best GNN models across tasks; (3) an effective GNN evaluation technique so that we can convincingly evaluate any GNN design question, such as β€œIs BatchNorm generally useful for GNNs?”. Overall, we provide the first systematic investigation of general guidelines for GNN design, understandings of GNN tasks, and how to transfer the best GNN designs across tasks. We release GraphGym as an easy-to-use code platform for GNN architectural design. More information can be found in the paper: Design Space for Graph Neural Networks

πŸ“½ Watch

πŸ“²Channel: @ComplexNetworkAnalysis
#video #course #Graph #GNN #Machine_Learning
πŸ“„ Graph Data Management and Graph Machine Learning: Synergies and Opportunities

πŸ—“
Publish year: 2025

πŸ§‘β€πŸ’»Authors: Arijit Kha, Xiangyu Ke, Yinghui Wu
🏒University:
- Aalborg University, Denmark
- Zhejiang University, China

- Case Western Reserve University, USA

πŸ“Ž Study the paper

⚑️Channel: @ComplexNetworkAnalysis
#review #graph #machine_learning #data_management
πŸ‘1
🎞 Machine Learning with Graphs: GraphSAGE Neighbor Sampling

πŸ’₯Free recorded course by Prof. Jure Leskovec

πŸ’₯ This part discussed Neighbor Sampling, That is a representative method used to scale up GNNs to large graphs. The key insight is that a K-layer GNN generates a node embedding by using only the nodes from the K-hop neighborhood around that node. Therefore, to generate embeddings of nodes in the mini-batch, only the K-hop neighborhood nodes and their features are needed to load onto a GPU, a tractable operation even if the original graph is large. To further reduce the computational cost, only a subset of neighboring nodes is sampled for GNNs to aggregate.


πŸ“½ Watch

πŸ“²Channel: @ComplexNetworkAnalysis
#video #course #Graph #GNN #Machine_Learning #GraphSAGE