Forwarded from Network Analysis Resources & Updates
πNetwork Learning for Biomarker Discovery
π Publish year: 2023
πJournal: International Journal of Network Dynamics and Intelligence (IJNDI)
π§βπ»Authors: Yulian Ding, Minghan Fu, Ping Luo, Fang-Xiang Wu
π’Universities: University of Saskatchewan, S7N 5A9, Saskatoon, Canada,
University Health Network, Toronto, ON M5G 1L7, Canada,
University of Saskatchewan, S7N 5A9, Saskatoon, Canada
π Study paper
π±Channel: @ComplexNetworkAnalysis
#paper #Network #Learning #Biomarker #Discovery
π Publish year: 2023
πJournal: International Journal of Network Dynamics and Intelligence (IJNDI)
π§βπ»Authors: Yulian Ding, Minghan Fu, Ping Luo, Fang-Xiang Wu
π’Universities: University of Saskatchewan, S7N 5A9, Saskatoon, Canada,
University Health Network, Toronto, ON M5G 1L7, Canada,
University of Saskatchewan, S7N 5A9, Saskatoon, Canada
π Study paper
π±Channel: @ComplexNetworkAnalysis
#paper #Network #Learning #Biomarker #Discovery
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π 8 Bioinformatics Projects for Students: Ultimate Step by Step Guide
π Study
π²Channel: @Bioinformatics
#technical #project
π Study
π²Channel: @Bioinformatics
#technical #project
Data Science For Bio
8 Bioinformatics Projects for Students in 2025: Innovative Ideas and Step-by-Step Guides - Data Science For Bio
Here are 8 detailed bioinformatics projects for students, complete with step-by-step instructions and resources.
π17β€7π2π1
π A Survey on Methods for Predicting Polyadenylation Sites from DNA Sequences, Bulk RNA-Seq, and Single-Cell RNA-Seq
πJournal: Genomics, Proteomics & Bioinformatics (GPB) (I.F.=9.5)
πPublish year: 2022
π§βπ»Authors: Wenbin Ye, Qiwei Lian, Congting Ye, Xiaohui Wu
π’University: Soochow University - Xiamen University, China
π Study the paper
π²Channel: @Bioinformatics
#review #Polyadenylation #RNA_Seq #Single_Cell
πJournal: Genomics, Proteomics & Bioinformatics (GPB) (I.F.=9.5)
πPublish year: 2022
π§βπ»Authors: Wenbin Ye, Qiwei Lian, Congting Ye, Xiaohui Wu
π’University: Soochow University - Xiamen University, China
π Study the paper
π²Channel: @Bioinformatics
#review #Polyadenylation #RNA_Seq #Single_Cell
π5β€4π1
π¦ 3 Days recorded workshop on from UCLA
π₯ RNA-seq I Analysis
β«οΈPart 1
β«οΈPart 2
β«οΈPart 3
π²Channel: @Bioinformatics
#video #rna_seq
π₯ RNA-seq I Analysis
β«οΈPart 1
β«οΈPart 2
β«οΈPart 3
π²Channel: @Bioinformatics
#video #rna_seq
YouTube
W5a: RNA-seq I Analysis - Day 1
RNA-seq I aims to provide an introduction and the basics tools to process raw RNA-seq data on a cluster machine (Hoffman2). The workshop can serve also as a starting point to develop a gene expression project. This workshop is divided in three days that willβ¦
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π Advancing genome editing with artificial intelligence: opportunities, challenges, and future directions
π Journal: Frontiers in Bioengineering and Biotechnology (I.F.=5.7)
πPublish year: 2024
π§βπ»Authors: Shriniket Dixit, Anant Kumar, Kathiravan Srinivasan, ...
π’University: Vellore Institute of Technology, India
π Study the paper
π²Channel: @Bioinformatics
#review #genome_editing #crisper
π Journal: Frontiers in Bioengineering and Biotechnology (I.F.=5.7)
πPublish year: 2024
π§βπ»Authors: Shriniket Dixit, Anant Kumar, Kathiravan Srinivasan, ...
π’University: Vellore Institute of Technology, India
π Study the paper
π²Channel: @Bioinformatics
#review #genome_editing #crisper
π4β€2π1
π The Use of Artificial Intelligence in Writing Scientific Review Articles
π Journal: Current Osteoporosis Reports (I.F.=4.3)
πPublish year: 2024
π§βπ»Authors: Melissa A. Kacena, Lilian I. Plotkin & Jill C. Fehrenbacher
π’University: Indiana University School of Medicine, USA
π Study the paper
π²Channel: @Bioinformatics
#chatgpt #ai #writing
π Journal: Current Osteoporosis Reports (I.F.=4.3)
πPublish year: 2024
π§βπ»Authors: Melissa A. Kacena, Lilian I. Plotkin & Jill C. Fehrenbacher
π’University: Indiana University School of Medicine, USA
π Study the paper
π²Channel: @Bioinformatics
#chatgpt #ai #writing
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π On the Responsible Use of Chatbots in Bioinformatics
π Journal: Genomics, Proteomics & Bioinformatics (GPB) (I.F.=9.5)
πPublish year: 2024
π§βπ»Authors: Gangqing Hu, Li Liu, Dong Xu
π’University: West Virginia University, Arizona State University, University of Missouri, USA
π Study the paper
π²Channel: @Bioinformatics
#chatgpt #chatbot
π Journal: Genomics, Proteomics & Bioinformatics (GPB) (I.F.=9.5)
πPublish year: 2024
π§βπ»Authors: Gangqing Hu, Li Liu, Dong Xu
π’University: West Virginia University, Arizona State University, University of Missouri, USA
π Study the paper
π²Channel: @Bioinformatics
#chatgpt #chatbot
OUP Academic
On the Responsible Use of Chatbots in Bioinformatics
Large language model (LLM)-based chatbots like Chat Generative Pre-trained Transformer (ChatGPT), equipped with broad biological knowledge [1], have demons
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π Cancer driver mutations: predictions and reality
π Journal: Trends in Molecular Medicine (I.F.=13.6)
πPublish year: 2023
π§βπ»Authors: Daria Ostroverkhova, Teresa M. Przytycka, Anna R. Panchenko
π’University: Queen's University, Canada - National Institutes of Health (NIH), USA
π Study the paper
π²Channel: @Bioinformatics
#review #cancer #mutation #driver
π Journal: Trends in Molecular Medicine (I.F.=13.6)
πPublish year: 2023
π§βπ»Authors: Daria Ostroverkhova, Teresa M. Przytycka, Anna R. Panchenko
π’University: Queen's University, Canada - National Institutes of Health (NIH), USA
π Study the paper
π²Channel: @Bioinformatics
#review #cancer #mutation #driver
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πA systematic review of biologically-informed deep learning models for cancer: fundamental trends for encoding and interpreting oncology data
π Journal: BMC Bioinformatics (I.F.=3)
πPublish year: 2023
π§βπ»Authors: Magdalena Wysocka, Oskar Wysocki, Marie Zufferey, ...
π’University: University of Manchester, UK - National University of Sciences, Switzerland
π Study the paper
π²Channel: @Bioinformatics
#review #cancer #deep_learning
π Journal: BMC Bioinformatics (I.F.=3)
πPublish year: 2023
π§βπ»Authors: Magdalena Wysocka, Oskar Wysocki, Marie Zufferey, ...
π’University: University of Manchester, UK - National University of Sciences, Switzerland
π Study the paper
π²Channel: @Bioinformatics
#review #cancer #deep_learning
π4π1
π Growing bioinformatics capacity in Africa
π₯Nature Podcast
π§ Listen
π Read
π²Channel: @Bioinformatics
#podcast #Africa
π₯Nature Podcast
π§ Listen
π Read
π²Channel: @Bioinformatics
#podcast #Africa
Nature
Growing bioinformatics capacity in Africa
Nature Africa - Continent-wide efforts to stem the tide of diseases.
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π₯ Proteomics for Clinical Biomarkers
π₯ From Biotechnology Department at University of the Western Cape
π Watch
π¦ Slides
π²Channel: @Bioinformatics
#video #proteomics #biomarker
π₯ From Biotechnology Department at University of the Western Cape
π Watch
π¦ Slides
π²Channel: @Bioinformatics
#video #proteomics #biomarker
YouTube
20230821 Proteomics for Clinical Biomarkers
Slides for this talk can be downloaded here: https://drive.google.com/file/d/1ILhlG1Ksq1kq1iQnmQBdNcTHVqC_j1Tz/view?usp=sharing
As part of the B.Sc. Honours program at the Biotechnology Department at University of the Western Cape, I edited this lectureβ¦
As part of the B.Sc. Honours program at the Biotechnology Department at University of the Western Cape, I edited this lectureβ¦
π5π1π1
π Differential gene expression analysis pipelines and bioinformatic tools for the identification of specific biomarkers: A review
πJournal: Computational and Structural Biotechnology Journal (CSBJ) (I.F.=6)
πPublish year: 2024
π§βπ»Authors: Diletta Rosati, Maria Palmieri, Giulia Brunelli, ...
π’University: University of Siena, Italy - Temple University, USA
π Study the paper
π²Channel: @Bioinformatics
#review #gene_expression #differential #biomarker
πJournal: Computational and Structural Biotechnology Journal (CSBJ) (I.F.=6)
πPublish year: 2024
π§βπ»Authors: Diletta Rosati, Maria Palmieri, Giulia Brunelli, ...
π’University: University of Siena, Italy - Temple University, USA
π Study the paper
π²Channel: @Bioinformatics
#review #gene_expression #differential #biomarker
π8β€4π1
πMachine Learning Techniques for Predicting Drug-Related Side Effects: A Scoping Review
πJournal: Pharmaceuticals (I.F.=4.3)
πPublish year: 2024
π§βπ»Authors: Esmaeel Toni,Haleh Ayatollahi,Reza Abbaszadeh, ...
π’University: Iran University of Medical Sciences, Institute of Biochemistry and Biophysics (IBB) at University of Tehran, Iran
π Study the paper
π²Channel: @Bioinformatics
#review #drug #side_effect
πJournal: Pharmaceuticals (I.F.=4.3)
πPublish year: 2024
π§βπ»Authors: Esmaeel Toni,Haleh Ayatollahi,Reza Abbaszadeh, ...
π’University: Iran University of Medical Sciences, Institute of Biochemistry and Biophysics (IBB) at University of Tehran, Iran
π Study the paper
π²Channel: @Bioinformatics
#review #drug #side_effect
π6π₯1π1
Forwarded from Network Analysis Resources & Updates
πHealthcare knowledge graph construction: A systematic review of the state-of-the-art, open issues, and opportunities
π Publish year: 2023
πJournal: Journal of Big Data
π§βπ»Authors: Bilal Abu-Salih, Muhammad AL-Qurishi, Mohammed Alweshah, Mohammad AL-Smadi, Reem Alfayez and Heba Saadeh
π’Universities: The University of Jordan, Amman, Jordan
King Saud University, Riyadh, Saudi Arabia
Al-Balqa Applied University, Salt, Jordan
π Study paper
π±Channel: @ComplexNetworkAnalysis
#paper #Healthcare #Knowledge_Graph #open_issues #opportunities #review
π Publish year: 2023
πJournal: Journal of Big Data
π§βπ»Authors: Bilal Abu-Salih, Muhammad AL-Qurishi, Mohammed Alweshah, Mohammad AL-Smadi, Reem Alfayez and Heba Saadeh
π’Universities: The University of Jordan, Amman, Jordan
King Saud University, Riyadh, Saudi Arabia
Al-Balqa Applied University, Salt, Jordan
π Study paper
π±Channel: @ComplexNetworkAnalysis
#paper #Healthcare #Knowledge_Graph #open_issues #opportunities #review
π3π₯1π―1
π¨βπ» PhD fellowship in Bioinformatics/Data Science/Machine Learning
π’ at Department of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen
π¨βπ«Principal supervisor
Albert J. Kooistra, Associate Professor
π¬Email:
[email protected]
πphone:
+45 35 32 83 05
β«οΈStart: 1 October 2024
β«οΈDuration: 3 years as a PhD student
π£ Deadline: 21 July 2024, 23.59pm CET
π More Details
π²Channel: @Bioinformatics
#job
π’ at Department of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen
π¨βπ«Principal supervisor
Albert J. Kooistra, Associate Professor
π¬Email:
[email protected]
πphone:
+45 35 32 83 05
β«οΈStart: 1 October 2024
β«οΈDuration: 3 years as a PhD student
π£ Deadline: 21 July 2024, 23.59pm CET
π More Details
π²Channel: @Bioinformatics
#job
employment.ku.dk
PhD-positions
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π A review of the current state of single-cell proteomics and future perspective
πJournal: Analytical and Bioanalytical Chemistry (I.F.=4.3)
πPublish year: 2023
π§βπ»Authors: Rushdy Ahmad & Bogdan Budnik
π’University: Harvard University, USA
π Study the paper
π²Channel: @Bioinformatics
#review #single_cell #proteomics
πJournal: Analytical and Bioanalytical Chemistry (I.F.=4.3)
πPublish year: 2023
π§βπ»Authors: Rushdy Ahmad & Bogdan Budnik
π’University: Harvard University, USA
π Study the paper
π²Channel: @Bioinformatics
#review #single_cell #proteomics
πΉ AI in Target Identification and Drug Discovery: Transforming the Future of Medicine
π Watch
π²Channel: @Bioinformatics
#video #ai #drug
π Watch
π²Channel: @Bioinformatics
#video #ai #drug
YouTube
DataBytes | AI in Target Identification and Drug Discovery: Transforming the Future of Medicine
Artificial intelligence (Al) is taking a transformative role in target identification and drug discovery. Today, Al algorithms can analyze vast, multi-modal datasets to identify drug targets, accelerate lead compound discovery, and optimize drug design. Alβ¦
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π Integrative computational approaches for discovery and evaluation of lead compound for drug design
πJournal: Frontiers in Drug Discovery
πPublish year: 2024
π§βπ»Authors: Utkarsha Naithani & Vandana Guleria
π’University: Shoolini University, India
π Study the paper
π²Channel: @Bioinformatics
#review #drug
πJournal: Frontiers in Drug Discovery
πPublish year: 2024
π§βπ»Authors: Utkarsha Naithani & Vandana Guleria
π’University: Shoolini University, India
π Study the paper
π²Channel: @Bioinformatics
#review #drug
π6π₯1