Bioinformatics
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Bioinformatics, Computational Biology & Systems Biology

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๐Ÿ“‘A Systematic Review of Artificial Intelligence Techniques in Cancer Prediction and Diagnosis

๐Ÿ“˜Journal: Archives of Computational Methods in Engineering (I.F.=7.302)
๐Ÿ—“Publish year: 2021

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๐Ÿ“ฒChannel: @Bioinformatics
#review #cancer
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๐Ÿ‘จโ€๐ŸซApplied Computational Genomics Course

๐Ÿ’ฅUtah University Full archive Spring 2020
๐Ÿ“‚Including Youtube + Slides + Homeworks + ...

๐ŸŒ Go to online course

๐Ÿ“ฒChannel: @Bioinformatics

#course #genomics
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๐Ÿ“„Computational Methods for Identifying Similar Diseases
๐Ÿ’ฅReview paper

๐Ÿ“˜Journal: Molecular Therapy Nucleic Acids (I.F.=8.886)
๐Ÿ—“Publish year: 2019

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๐Ÿ“ฒChannel: @Bioinformatics
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๐Ÿ“„A review on the application of bioinformatics tools in food microbiome studies

๐Ÿ“˜Journal: Briefings in Bioinformatics (I.F.=11.622)
๐Ÿ—“Publish year: 2022

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๐Ÿ“ฒChannel: @Bioinformatics

#review #microbiome
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๐Ÿ“„Complex Brain Network Analysis and Its Applications to Brain Disorders: A Survey

๐Ÿ“˜Journal: Complexity (I.F=2.833)

๐Ÿ—“Publish year: 2017

๐Ÿ“Ž
Study paper

๐Ÿ“ฒChannel: @ComplexNetworkAnalysis

#paper #survey #brain
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๐Ÿ“‘ Biomedical data and computational models for drug repositioning: a comprehensive review

๐Ÿ“˜Journal: Briefings in Bioinformatics (I.F.=11.622)
๐Ÿ—“Publish year: 2020

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๐Ÿ“ฒChannel: @Bioinformatics

#review #drug_repositioning #biomedical
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๐Ÿ“ƒExploring Chemical Information in PubChem

๐Ÿ“˜Journal: Current Protocols
๐Ÿ—“Publish year: 2021

๐Ÿ’ฅBasic Protocols investigated:
โ–ซ๏ธFinding genes and proteins that interact with a given compound
โ–ซ๏ธFinding drug-like compounds similar to a query compound through a two-dimensional (2-D) similarity search
โ–ซ๏ธFinding compounds similar to a query compound through a three-dimensional (3-D) similarity search
โ–ซ๏ธComputing similarity scores between compounds
โ–ซ๏ธGetting the bioactivity data for the hit compounds from substructure search
โ–ซ๏ธFinding drugs that target a particular gene
โ–ซ๏ธGetting bioactivity data of all chemicals tested against a protein.
โ–ซ๏ธFinding compounds annotated with classifications or ontological terms
โ–ซ๏ธFinding stereoisomers and isotopomers of a compound through identity search

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๐Ÿ“ฒChannel: @Bioinformatics

#database #pubchem
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๐Ÿ“ฐ From bioinformatics user to bioinformatics engineer: a report

๐Ÿ–‡ Study

๐Ÿ“ฒChannel: @Bioinformatics

#programming
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๐Ÿ“„A bioinformatics approach to microRNA-sequencing analysis

๐Ÿ“˜Journal: Osteoarthritis and Cartilage Open (I.F.=6.576)
๐Ÿ—“Publish year: 2021

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๐Ÿ“ฒChannel: @Bioinformatics
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๐Ÿ“˜ Network Analysis using R

๐Ÿ’ฅfree online Ebook

๐ŸŒ
Study

๐Ÿ“ฒChannel: @ComplexNetworkAnalysis

#ebook #r
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๐Ÿ“‘Hardware acceleration of genomics data analysis: challenges and opportunities

๐Ÿ“˜Journal: Briefings in Bioinformatics (I.F.=11.622)
๐Ÿ—“Publish year: 2021

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๐Ÿ“ฒChannel: @Bioinformatics

#GPU #HPC #FPGA #NoC
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๐Ÿ“– Current best practices in single-cell RNA-seq analysis: a tutorial

๐Ÿ“˜Journal: Molecular Systems Biology (I.F.=11.429)
๐Ÿ—“Publish year: 2019

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๐Ÿ“ฒChannel: @Bioinformatics

#tutorial #RNA_seq
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๐Ÿ“„Grasping frequent subgraph mining for bioinformatics applications

๐Ÿ“˜journal: Bio Data Mining (I.F=2.522)

๐Ÿ—“Publish year: 2018

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๐Ÿ“ฑChannel: @ComplexNetworkAnalysis

#paper #review #bioinformatics
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๐Ÿ“‘Microarray cancer feature selection: Review, challenges and research directions

๐Ÿ“˜journal: International Journal of Cognitive Computing in Engineering

๐Ÿ—“Publish year: 2020

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๐Ÿ“ฒChannel: @Bioinformatics

#review #microarray #cancer
๐Ÿ“„Introduction to differential gene expression analysis using RNA-seq
๐Ÿ’ฅWorkshop document from Weill Cornell Medical College

๐ŸŒ Study

๐Ÿ“ฒChannel: @Bioinformatics
#rna-seq
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