Bioinformatics
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Bioinformatics, Computational Biology & Systems Biology

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πŸ“„ The roles of code in biology

πŸ’₯ From abstract: The way in which computer code is perceived and used in biological research has been a source of some controversy and confusion, and has resulted in sub-optimal outcomes related to reproducibility, scalability and productivity. We suggest that the confusion is due in part to a misunderstanding of the function of code when applied to the life sciences. Code has many roles, and in this paper we present a three-dimensional taxonomy to classify those roles and map them specifically to the life sciences. We identify a β€˜β€˜sweet spot’’ in the taxonomyβ€”a convergence where bioinformaticians should concentrate their efforts in order to derive the most value from the time they spend using code...

πŸ“˜ Journal
: Science Progress Journal
πŸ—“Publish year: 2021

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πŸ‘¨β€πŸ«Bioinformatics resources for protein biology
πŸ’₯Free course materials from EMBL-EBI
πŸ“ Including videos and slides

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πŸ‘¨πŸ»β€πŸ’»Accomplished Workshop
πŸ’₯Microbiome bioinformatics analysis

πŸ”· Lessons:
▫️Set up and resources
▫️Sequence processing
▫️Data cleaning
▫️Data visualization

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πŸ“œHow to develop Bioinformatics software (Step-by-Step)
guide for beginners

πŸ”·
Table of contents:
▫️Stage 1: Learning the basics
▫️Stage 2: Program development
▫️Stage 3: Finalization, Validation, and Marketing
▫️Why Bioinformatics tools are in High Demands?
▫️Important tips for designing bioinformatics software
▫️Summary
▫️Final
thoughts

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🎞Sequencing Malaria in Focus

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πŸ“‘Computational Genomics in the Era of Precision Medicine: Applications to Variant Analysis and Gene Therapy

πŸ“˜ Journal
: Journal of Personalized Medicine (I.F.=4.945)
πŸ—“Publish year: 2022

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πŸ“ƒ Current progress and open challenges for applying deep learning across the biosciences

πŸ“˜ Journal: Nature Communications (I.F.=15.805)
πŸ—“Publish year: April 2022

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πŸ‘¨β€πŸ«Network analysis of protein interaction data
πŸ’₯Free online tutorial from EMBL-EBI

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πŸ“‘Graph- and rule-based learning algorithms: a comprehensive review of their applications for cancer type classification and prognosis using genomic data

πŸ“˜Journal: Briefings in Bioinformatics (I.F.=11.622)
πŸ—“Publish year: 2020

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πŸ‘©β€πŸ«Free Online Course:
Genomics for Educators

⏳ Duration: 3 weeks
⌚️Weekly study: 4 hours
🌐Format: 100% online
πŸ”°Start: 2 May

ℹ️ More information and Registration

πŸ“²Channel: @Bioinformatics
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πŸ“„Guide to Metabolomics Analysis: A Bioinformatics Workflow

πŸ“˜Journal: Metabolites Journal (I.F.=4.932)
πŸ—“Publish year: 2022

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πŸ“„Graph representation learning for structural proteomics

πŸ“˜Journal: Emerging Topics in Life Sciences
πŸ—“Publish year: 2021

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⭐️ The Top 4,436 Bioinformatics Open Source Projects on Github

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πŸ‘¨β€πŸ«Protein interactions and their importance
πŸ’₯Free online tutorial from EMBL-EBI

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πŸŽ“ PhD Dissertation:
πŸ’₯Genomics tools: the new frontier in omics data analysisπŸ’₯

πŸ“Ž
Study full thesis

πŸ“²Channel: @Bioinformatics
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