👷Remote Job: Bioinformatics Analyst
💥Job summery: Primary accountability is to leverage the organization’s data assets exome sequencing data (>180,000 individuals) from MyCode Community Health Initiative to improve quality, efficiency and generate knowledge specifically in the field of bioinformatics within health research. Performs and supervises complex data extraction, transformation, visualization, and summarization to support Research and operations activities.. Uses data reporting/management tools such as SQL, python, NGS tools (GATK, BWA, VEP, etc.), genomic databases (ClinVar, NCBI, gnomAD, etc.) and contributes to national publications. Uses multiple operating systems (Windows, Linux) and compute environments (local, cloud) and is responsible for assisting in development and maintenance of bioinformatics capabilities.
ℹ️ More information and apply
📲Channel: @Bioinformatics
💥Job summery: Primary accountability is to leverage the organization’s data assets exome sequencing data (>180,000 individuals) from MyCode Community Health Initiative to improve quality, efficiency and generate knowledge specifically in the field of bioinformatics within health research. Performs and supervises complex data extraction, transformation, visualization, and summarization to support Research and operations activities.. Uses data reporting/management tools such as SQL, python, NGS tools (GATK, BWA, VEP, etc.), genomic databases (ClinVar, NCBI, gnomAD, etc.) and contributes to national publications. Uses multiple operating systems (Windows, Linux) and compute environments (local, cloud) and is responsible for assisting in development and maintenance of bioinformatics capabilities.
ℹ️ More information and apply
📲Channel: @Bioinformatics
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📑Challenges in Bioinformatics Workflows for Processing Microbiome Omics Data at Scale
📘Journal: Frontiers in Bioinformatics
🗓Publish year: 2022
🌐 Study the paper
📲Channel: @Bioinformatics
👍3
📑 Artificial Intelligence and Machine Learning in Precision and Genomic Medicine
📘 Preprint paper
🌐 Study the article
📲Channel: @Bioinformatics
📘 Preprint paper
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📲Channel: @Bioinformatics
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📃Statistics or biology: the zero-inflation controversy about scRNA-seq data
📘Journal: Genome Biology (I.F.=13.583)
🗓Publish year: 2022
💥Abstract: Researchers view vast zeros in single-cell RNA-seq data differently: some regard zeros as biological signals representing no or low gene expression, while others regard zeros as missing data to be corrected. To help address the controversy, here we discuss the sources of biological and non-biological zeros; introduce five mechanisms of adding non-biological zeros in computational benchmarking; evaluate the impacts of non-biological zeros on data analysis; benchmark three input data types: observed counts, imputed counts, and binarized counts; discuss the open questions regarding non-biological zeros; and advocate the importance of transparent analysis.
🌐 Study the paper
📲Channel: @Bioinformatics
📘Journal: Genome Biology (I.F.=13.583)
🗓Publish year: 2022
💥Abstract: Researchers view vast zeros in single-cell RNA-seq data differently: some regard zeros as biological signals representing no or low gene expression, while others regard zeros as missing data to be corrected. To help address the controversy, here we discuss the sources of biological and non-biological zeros; introduce five mechanisms of adding non-biological zeros in computational benchmarking; evaluate the impacts of non-biological zeros on data analysis; benchmark three input data types: observed counts, imputed counts, and binarized counts; discuss the open questions regarding non-biological zeros; and advocate the importance of transparent analysis.
🌐 Study the paper
📲Channel: @Bioinformatics
👍4❤1
📃Design, delivery and evaluation of a bioinformatics education workshop for 13-16-year-olds
📘Journal: Genome Biology (I.F.=1.262)
🗓Publish year: 2021
🖇 Study the paper
📲Channel: @Bioinformatics
📘Journal: Genome Biology (I.F.=1.262)
🗓Publish year: 2021
🖇 Study the paper
📲Channel: @Bioinformatics
Taylor & Francis
Design, delivery and evaluation of a bioinformatics education workshop for 13-16-year-olds
Bioinformatics is the use of computers in biology, particularly to analyse DNA and protein sequences and associated data. Bioinformatics has become crucial to most areas of life sciences research. ...
👍1
📑Machine learning for multi-omics data integration in cancer
📘Journal: IScience (I.F.=5.458)
🗓Publish year: 2022
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📲Channel: @Bioinformatics
📘Journal: IScience (I.F.=5.458)
🗓Publish year: 2022
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📲Channel: @Bioinformatics
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📺 BioInformatics: Algorithms and Applications
💥YouTube playlists curated by Class Central (69 sessions)
🌐 Watch
📲Channel: @Bioinformatics
💥YouTube playlists curated by Class Central (69 sessions)
🌐 Watch
📲Channel: @Bioinformatics
📑A Bibliometric Analysis of Mexican Bioinformatics: A Portrait of Actors, Structure, and Dynamics
📘Journal: Biology (I.F.=5.079)
🗓Publish year: 2022
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📲Channel: @Bioinformatics
📘Journal: Biology (I.F.=5.079)
🗓Publish year: 2022
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📲Channel: @Bioinformatics
👍3❤1
📄Recent Advances of Deep Learning in Bioinformatics and Computational Biology
📘Journal: Frontiers in Genetics (I.F.=5.599)
🗓Publish year: 2019
💥Abstract: Extracting inherent valuable knowledge from omics big data remains as a daunting problem in bioinformatics and computational biology. Deep learning, as an emerging branch from machine learning, has exhibited unprecedented performance in quite a few applications from academia and industry. We highlight the difference and similarity in widely utilized models in deep learning studies, through discussing their basic structures, and reviewing diverse applications and disadvantages. We anticipate the work can serve as a meaningful perspective for further development of its theory, algorithm and application in bioinformatic and computational biology.
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📲Channel: @Bioinformatics
📘Journal: Frontiers in Genetics (I.F.=5.599)
🗓Publish year: 2019
💥Abstract: Extracting inherent valuable knowledge from omics big data remains as a daunting problem in bioinformatics and computational biology. Deep learning, as an emerging branch from machine learning, has exhibited unprecedented performance in quite a few applications from academia and industry. We highlight the difference and similarity in widely utilized models in deep learning studies, through discussing their basic structures, and reviewing diverse applications and disadvantages. We anticipate the work can serve as a meaningful perspective for further development of its theory, algorithm and application in bioinformatic and computational biology.
🌐 Study the paper
📲Channel: @Bioinformatics
👍6❤1
🎬 Free webinar
💥Deciphering the cellular, molecular, clinical and therapeutic implications of lung cancers lacking targeted therapies
🗓 Date: 15th February
🕖 Time: From 19 to 20 p.m, CET
🇬🇧Language: English
ℹ️ Registration and more information
📲Channel: @Bioinformatics
💥Deciphering the cellular, molecular, clinical and therapeutic implications of lung cancers lacking targeted therapies
🗓 Date: 15th February
🕖 Time: From 19 to 20 p.m, CET
🇬🇧Language: English
ℹ️ Registration and more information
📲Channel: @Bioinformatics
Eventbrite
BioInfoClub | Bioinformatic study of lung cancers without therapies
Deciphering the cellular, molecular, clinical and therapeutic implications of lung cancers lacking targeted therapies
👨🏫 Free Online Course:
Artificial Intelligence in Bioinformatics
🗓 Duration: 3 weeks (Self paced)
💥What you'll learn:
▫️Overview on bioinformatics
▫️Artificial Intelligence and how to apply it to bioinformatics
▫️Feature engineering
▫️Feature learning
▫️Deep learning in bioinformatics
▫️Analyzing and visualizing data
ℹ️ More information and Participation
📲Channel: @Bioinformatics
Artificial Intelligence in Bioinformatics
🗓 Duration: 3 weeks (Self paced)
💥What you'll learn:
▫️Overview on bioinformatics
▫️Artificial Intelligence and how to apply it to bioinformatics
▫️Feature engineering
▫️Feature learning
▫️Deep learning in bioinformatics
▫️Analyzing and visualizing data
ℹ️ More information and Participation
📲Channel: @Bioinformatics
FutureLearn
Artificial Intelligence in Bioinformatics - Online AI Course - FutureLearn
Join Taipei University’s online course to explore how AI is transforming the field of bioinformatics, and build your working knowledge of AI-based bioinformatics.
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📑Ten Simple Rules for writing algorithmic bioinformatics conference papers
📘Journal: PLOS Computational Biology (I.F.=4.475)
🗓Publish year: 2020
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📲Channel: @Bioinformatics
📘Journal: PLOS Computational Biology (I.F.=4.475)
🗓Publish year: 2020
📎 Study the paper
📲Channel: @Bioinformatics
👍1
🎖 11th ISCB Student Wikipedia competition announcement
The competition aims to improve Wikipedia's coverage of any topic relating to ISCB's Bioinformatics Core Competencies
💣 Deadline: 29 April 2022
🏆Prizes:
🥇1st prize - $500 (USD) and 1 year membership to the ISCB
🥈2nd prize - $250 (USD) and 1 year membership to the ISCB
🥉3rd prize - $150 (USD) and 1 year membership to the ISCB
ℹ️ More information
📲Channel: @Bioinformatics
The competition aims to improve Wikipedia's coverage of any topic relating to ISCB's Bioinformatics Core Competencies
💣 Deadline: 29 April 2022
🏆Prizes:
🥇1st prize - $500 (USD) and 1 year membership to the ISCB
🥈2nd prize - $250 (USD) and 1 year membership to the ISCB
🥉3rd prize - $150 (USD) and 1 year membership to the ISCB
ℹ️ More information
📲Channel: @Bioinformatics
Wikipedia
Wikipedia:WikiProject Molecular Biology/Computational Biology/11th ISCB Student Wikipedia competition announcement
The International Society for Computational Biology (ISCB) and the Computational Biology taskforce of WikiProject Molecular Biology announce the 11th ISCB Student Wikipedia Competition: the competition aims to improve Wikipedia's coverage of any topic relating…
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🎬 Free webinar
🇪🇸Big data and Artificial Intelligence: towards personalized medicine
🗓 Date: 4 February, 2022
🕖 Time: 12:30 p.m.
ℹ️ Participate (in Microsoft Teams)
📲Channel: @Bioinformatics
🇪🇸Big data and Artificial Intelligence: towards personalized medicine
🗓 Date: 4 February, 2022
🕖 Time: 12:30 p.m.
ℹ️ Participate (in Microsoft Teams)
📲Channel: @Bioinformatics
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🎬 Free webinar hosted by the Genomic Institute
💥Genomics in Practice
🗓 Date: Thursday 24 February
🕖 Time: 4:00pm to 5:30pm AEST
ℹ️ More information
✍🏻 Registration
📲Channel: @Bioinformatics
💥Genomics in Practice
🗓 Date: Thursday 24 February
🕖 Time: 4:00pm to 5:30pm AEST
ℹ️ More information
✍🏻 Registration
📲Channel: @Bioinformatics
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🎬 Free webinar
💥Biomarker Discovery from Gene Expression: Challenges and Solutions for Success
🗓 Date: Thursday 24 February
🕖 Time: 11am EST (NA) / 4pm GMT (UK) / 5pm CET (EU-Central)
ℹ️ More information
✍🏻 Registration (Creating an account is required)
📲Channel: @Bioinformatics
💥Biomarker Discovery from Gene Expression: Challenges and Solutions for Success
🗓 Date: Thursday 24 February
🕖 Time: 11am EST (NA) / 4pm GMT (UK) / 5pm CET (EU-Central)
ℹ️ More information
✍🏻 Registration (Creating an account is required)
📲Channel: @Bioinformatics
Xtalks
Biomarker Discovery from Gene Expression: Challenges and Solutions for Success
Join this webinar to learn about biomarker discovery from gene expression and bioinformatics innovations with case study examples.
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🎞Introduction to Glycoinformatics
💥Free online recent course
▫️Part 1
▫️Part 2
▫️Part 3
▫️Part 4
📲Channel: @Bioinformatics
💥Free online recent course
▫️Part 1
▫️Part 2
▫️Part 3
▫️Part 4
📲Channel: @Bioinformatics
YouTube
Introduction to Glycoinformatics (1 of 4)
Glycan molecules decorate a broad variety of surface or secreted proteins and the literature is filled with unnoticed references focusing on the “glyco” part of glycoproteins. This course is an opportunity to update and extend your knowledge of glycoproteins…
👨🏫 Registration is open for One month Bioinformatics Workshop
💥 Data science and Machine learning for Bioinformatics with "R"💥
🗓 Duration: 19 February - 18 March, 2022
✍️ Registration Link
https://decodelife.co.in
💲 Fees: Rupees 1200 for Indian Participants /USD 25 for international Participants
💥Key Features:
▫️ 20 sessions with approximately 35 hrs of learning
▫️E- Certificate of Participation
📲Channel: @Bioinformatics
💥 Data science and Machine learning for Bioinformatics with "R"💥
🗓 Duration: 19 February - 18 March, 2022
✍️ Registration Link
https://decodelife.co.in
💲 Fees: Rupees 1200 for Indian Participants /USD 25 for international Participants
💥Key Features:
▫️ 20 sessions with approximately 35 hrs of learning
▫️E- Certificate of Participation
📲Channel: @Bioinformatics
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⏺Free recorded webinar
🎥What single-cell RNA-sequencing is, and the workflow in terms of quality control, clustering and differential gene expression analysis
🌐 Watch
📲Channel: @Bioinformatics
🎥What single-cell RNA-sequencing is, and the workflow in terms of quality control, clustering and differential gene expression analysis
🌐 Watch
📲Channel: @Bioinformatics
YouTube
Analysis workflow for single-cell RNA-sequencing data
In this presentation, Fios Genomics Bioinformatician Katerina Boufea talks through an analysis workflow for single-cell RNA-sequencing data. She explains what single-cell RNA-sequencing is before going on to discuss the workflow in terms of quality control…