Bioinformatics
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Bioinformatics, Computational Biology & Systems Biology

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πŸ“„ Application of Deep Learning on Single-Cell RNA Sequencing Data Analysis: A Review

πŸ“˜Journal: Genomics, Proteomics and Bioinformatics (I.F.= 9.5)
πŸ—“ Publish year: 2022

πŸ§‘β€πŸ’»Authors: Matthew Brendel, Chang Su, Zilong Bai, ...
🏒University: Cornell University - Temple University, USA

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πŸ“²Channel: @Bioinformatics
#review #deep_learning #single_cell #rna
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πŸ“ƒ Leveraging Biomolecule and Natural Language through Multi-Modal Learning: A Survey

πŸ—“
Publish year: 2024

πŸ§‘β€πŸ’»Authors: Qizhi Pei, Lijun Wu, Kaiyuan Gao, Jinhua Zhu, ...
🏒University: Renmin University of China, University of Science and Technology of China, Microsoft Research

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πŸ“¦ Related sources and contents

πŸ“²Channel: @Bioinformatics
#review #nlp #biomolecule #protein
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πŸ“‘ Ten simple rules for designing graphical abstracts

πŸ“•Journal: Plos Computational Biology (I.F.=4.3)
πŸ—“Publish year: 2024

πŸ§‘β€πŸ’»Authors: Helena Klara Jambor ,Martin BornhΓ€user
🏒University: UniversitÀtsklinikum Carl Gustav Carus an der Technischen UniversitÀt Dresden, Germany

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πŸ“²Channel: @Bioinformatics
#graphical_abstract
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πŸ“‘ Explainable artificial intelligence for omics data: a systematic mapping study

πŸ“—Journal: Briefings in Bioinformatics (I.F.=9.5)
πŸ—“Publish year: 2024

πŸ§‘β€πŸ’»Authors: Philipp A Toussaint, Florian Leiser, Scott Thiebes, ...
🏒University: Department of Economics and Management - University of Augsburg , Germany

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πŸ“²Channel: @Bioinformatics
#review #explainable #ai #omics
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πŸ“ƒ Recent Advances in Generative Adversarial Networks for Gene Expression Data: A Comprehensive Review

πŸ“—Journal: Mathematics (I.F.=2.4)
πŸ—“Publish year: 2023

πŸ§‘β€πŸ’»Authors: Minhyeok Lee
🏒University: Chung-Ang University, Republic of Korea

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πŸ“²Channel: @Bioinformatics
#review #GAN #gene_expression
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🎞 Machine Learning with Graphs: Graph Neural Networks in Computational Biology

πŸ’₯Free recorded course by Prof. Marinka Zitnik

πŸ’₯In this lecture, Prof. Marinka gives an overview of why graph learning techniques can greatly help with computational biology research. Concretely, this talk covers 3 exemplar use cases: (1) Discovering safe drug-drug combinations via multi-relational link prediction on heterogenous knowledge graphs; (2) Classify patient outcomes and diseases via learning subgraph embeddings; and (3) Learning effective disease treatments through few-shot learning for graphs.

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πŸ“²Channel: @ComplexNetworkAnalysis

#video #course #Graph #GNN #Machine_Learning #computational_biology
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πŸ“ƒ In silico protein function prediction: the rise of machine learning-based approaches

πŸ“™Journal: Medical Review (De Gruyter)
πŸ—“Publish year: 2023

πŸ§‘β€πŸ’»Authors: Jiaxiao Chen , Zhonghui Gu , Luhua Lai, Jianfeng Pei
🏒University: Peking University, China

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πŸ“²Channel: @Bioinformatics
#review #protein_function #ml
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