πΉ Graph Neural Networks in Computational Biology
π₯Recorded webinar from Imperial College Computational Biology Society
π Watch
π²Channel: @Bioinformatics
#video #gnn
π₯Recorded webinar from Imperial College Computational Biology Society
π Watch
π²Channel: @Bioinformatics
#video #gnn
YouTube
Graph Neural Networks in Computational Biology: A Personal Perspective - Petar VeliΔkoviΔ
Title: Graph Neural Networks in Computational Biology: A Personal Perspective
Abstract:
Graph neural networks (GNNs) have in recent years become an invaluable tool for machine learning with data in the form of graphs or sets. GNNs now frequently form theβ¦
Abstract:
Graph neural networks (GNNs) have in recent years become an invaluable tool for machine learning with data in the form of graphs or sets. GNNs now frequently form theβ¦
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π A Systematic Review of Deep Learning Methodologies Used in the Drug Discovery Process with Emphasis on In Vivo Validation
π Journal: International Journal of Molecular Sciences (I.F.=5.6)
π Publish year: 2023
π Study the paper
π²Channel: @Bioinformatics
#review #deep_learning #drug
π Journal: International Journal of Molecular Sciences (I.F.=5.6)
π Publish year: 2023
π Study the paper
π²Channel: @Bioinformatics
#review #deep_learning #drug
π5
π Large language models in bioinformatics: applications and perspectives
π arXiv preprint
π Publish year: 2024
π Study the paper
π²Channel: @Bioinformatics
#review #genomics #transcriptomics #proteomics #drug_discovery #single_cell_analysis
π arXiv preprint
π Publish year: 2024
π Study the paper
π²Channel: @Bioinformatics
#review #genomics #transcriptomics #proteomics #drug_discovery #single_cell_analysis
π6
π Deep learning methods for drug response prediction in cancer: Predominant and emerging trends
π Journal: International Journal of Molecular Sciences (I.F.=5.6)
π Publish year: 2023
π§βπ»Authors: Alexander Partin, Thomas S. Brettin, Yitan Zhu, Oleksandr Narykov, Austin Clyde, Jamie Overbeek, Rick L. Stevens
π’Universities: Argonne National Laboratory and The University of Chicago, IL, United States
π Study the paper
π²Channel: @Bioinformatics
#review #deep_learning #drug #cancer
π Journal: International Journal of Molecular Sciences (I.F.=5.6)
π Publish year: 2023
π§βπ»Authors: Alexander Partin, Thomas S. Brettin, Yitan Zhu, Oleksandr Narykov, Austin Clyde, Jamie Overbeek, Rick L. Stevens
π’Universities: Argonne National Laboratory and The University of Chicago, IL, United States
π Study the paper
π²Channel: @Bioinformatics
#review #deep_learning #drug #cancer
π₯2π1
π¨βπ« Registration is open for One month International Bioinformatics Workshop by Decode Life
π₯ Data Science and Machine learning - with Python, 8th Edition 2024 π₯
π Duration: 10 February - 7 March, 2024
βοΈ Registration Link
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π² Fees: Rupees 1200 for Indian Participants /USD 25 for international Participants
π₯Key Features:
β«οΈ 22 sessions with approximately 35 hrs of learning
β«οΈE- Certificate of Participation
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π²Channel: @Bioinformatics
π₯ Data Science and Machine learning - with Python, 8th Edition 2024 π₯
π Duration: 10 February - 7 March, 2024
βοΈ Registration Link
https://decodelife.co.in
π² Fees: Rupees 1200 for Indian Participants /USD 25 for international Participants
π₯Key Features:
β«οΈ 22 sessions with approximately 35 hrs of learning
β«οΈE- Certificate of Participation
βΉοΈ Recording & material will be shared immediately after sessions
βFrequently asked questions
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π²Channel: @Bioinformatics
π5π1
π A comprehensive survey of regulatory network inference methods using single cell RNA sequencing data
π Journal: Briefings in Bioinformatics (I.F.=9.5)
π Publish year: 2021
π§βπ»Authors: Hung Nguyen, Duc Tran, Bang Tran, Bahadir Pehlivan, Tin Nguyen
π’Universities: Department of Computer Science and Engineering, University of Nevada, USA
π Study the paper
π²Channel: @Bioinformatics
#review #grn #single_cell
π Journal: Briefings in Bioinformatics (I.F.=9.5)
π Publish year: 2021
π§βπ»Authors: Hung Nguyen, Duc Tran, Bang Tran, Bahadir Pehlivan, Tin Nguyen
π’Universities: Department of Computer Science and Engineering, University of Nevada, USA
π Study the paper
π²Channel: @Bioinformatics
#review #grn #single_cell
π4
Forwarded from Network Analysis Resources & Updates
π A Review of Link Prediction Applications in Network Biology
π Publish year: 2023
π§βπ»Authors: Ahmad F. Al Musawi, Satyaki Roy, Preetam Ghosh
π’Universities: Virginia Commonwealth University, University of Alabama in Huntsville
π Study the paper
π²Channel: @ComplexNetworkAnalysis
#review #Network_Biology #Link_Prediction
π Publish year: 2023
π§βπ»Authors: Ahmad F. Al Musawi, Satyaki Roy, Preetam Ghosh
π’Universities: Virginia Commonwealth University, University of Alabama in Huntsville
π Study the paper
π²Channel: @ComplexNetworkAnalysis
#review #Network_Biology #Link_Prediction
π3
π From pixels to insights: Machine learning and deep learning for bioimage analysis
π Journal: BioEssays (I.F.=4)
π Publish year: 2023
π§βπ»Authors: Mahta Jan, Allie Spangaro, Michelle Lenartowicz, Mojca Mattiazzi Usaj
π’University: Department of Chemistry and Biology, Toronto Metropolitan University, Canada
π Study the paper
π²Channel: @Bioinformatics
#review #bioimage #ml #deep_learning
π Journal: BioEssays (I.F.=4)
π Publish year: 2023
π§βπ»Authors: Mahta Jan, Allie Spangaro, Michelle Lenartowicz, Mojca Mattiazzi Usaj
π’University: Department of Chemistry and Biology, Toronto Metropolitan University, Canada
π Study the paper
π²Channel: @Bioinformatics
#review #bioimage #ml #deep_learning
π7
π A comprehensive review on knowledge graphs for complex diseases
π Journal: Briefings in Bioinformatics (I.F.=9.5)
π Publish year: 2023
π§βπ»Authors: Yang Yang, Yuwei Lu, Wenying Yan
π’University: Soochow University, Suzhou, China
π Study the paper
π²Channel: @Bioinformatics
#review #knowledge_graph #diease
π Journal: Briefings in Bioinformatics (I.F.=9.5)
π Publish year: 2023
π§βπ»Authors: Yang Yang, Yuwei Lu, Wenying Yan
π’University: Soochow University, Suzhou, China
π Study the paper
π²Channel: @Bioinformatics
#review #knowledge_graph #diease
π4
πOpportunities and challenges for ChatGPT and large language models in biomedicine and health
π Journal: Briefings in Bioinformatics (I.F.=9.5)
π Publish year: 2024
π§βπ»Authors: Shubo Tian, Qiao Jin, Lana Yeganova, Po-Ting Lai, Qingqing Zhu, ...
π’Universities: National Library of Medicine, National Institutes of Health, USA
π Study the paper
π²Channel: @Bioinformatics
#chatgpt #biomedicine #health
π Journal: Briefings in Bioinformatics (I.F.=9.5)
π Publish year: 2024
π§βπ»Authors: Shubo Tian, Qiao Jin, Lana Yeganova, Po-Ting Lai, Qingqing Zhu, ...
π’Universities: National Library of Medicine, National Institutes of Health, USA
π Study the paper
π²Channel: @Bioinformatics
#chatgpt #biomedicine #health
π3β€1π1
π Drugβdrug interaction prediction: databases, web servers and computational models
π Journal: Briefings in Bioinformatics (I.F.=9.5)
π Publish year: 2024
π§βπ»Authors: Yan Zhao, Jun Yin, Li Zhang, Yong Zhang, Xing Chen
π’Universities: China University of Mining and Technology, and Jiangnan University, China
π Study the paper
π²Channel: @Bioinformatics
#review #drug #database
π Journal: Briefings in Bioinformatics (I.F.=9.5)
π Publish year: 2024
π§βπ»Authors: Yan Zhao, Jun Yin, Li Zhang, Yong Zhang, Xing Chen
π’Universities: China University of Mining and Technology, and Jiangnan University, China
π Study the paper
π²Channel: @Bioinformatics
#review #drug #database
π2β€1π1
π A Clinicianβs Guide to Bioinformatics for Next-Generation Sequencing
πJournal: Journal of Thoracic Oncology (I.F.=20.4)
π Publish year: 2023
π§βπ»Authors: Nicholas Bradley Larson, Ann L. Oberg, Alex A. Adjei MD, Liguo Wang
π’Universities: Mayo Clinic College of Medicine and Science, Rochester, Minnesota, USA
Taussig Cancer Institute, Cleveland Clinic, Cleveland, Ohio, USA
π Study the paper
π²Channel: @Bioinformatics
#review #ngs #cancer
πJournal: Journal of Thoracic Oncology (I.F.=20.4)
π Publish year: 2023
π§βπ»Authors: Nicholas Bradley Larson, Ann L. Oberg, Alex A. Adjei MD, Liguo Wang
π’Universities: Mayo Clinic College of Medicine and Science, Rochester, Minnesota, USA
Taussig Cancer Institute, Cleveland Clinic, Cleveland, Ohio, USA
π Study the paper
π²Channel: @Bioinformatics
#review #ngs #cancer
π4β€3
π Computational Pathology: A Survey Review and The Way Forward
πJournal: Journal of Pathology Informatics
π Publish year: 2024
π§βπ»Authors: Mahdi S. Hosseini a, Babak Ehteshami Bejnordi b 1, Vincent Quoc-Huy Trinh c, ... (21 authors)
π’Universities: Concordia Univeristy, Canada - Qualcomm AI Research, Netherlands - ...
π Study the paper
π²Channel: @Bioinformatics
#review #pathology
πJournal: Journal of Pathology Informatics
π Publish year: 2024
π§βπ»Authors: Mahdi S. Hosseini a, Babak Ehteshami Bejnordi b 1, Vincent Quoc-Huy Trinh c, ... (21 authors)
π’Universities: Concordia Univeristy, Canada - Qualcomm AI Research, Netherlands - ...
π Study the paper
π²Channel: @Bioinformatics
#review #pathology
π1π1
π A review and comparative study of cancer detection using machine learning
πJournal: BMC Bioinformatics (I.F.=3)
π Publish year: 2023
π§βπ»Authors: Mpho Mokoatle, Vukosi Marivate, Darlington Mapiye, Riana Bornman & Vanessa. M. Hayes
π’Universities: University of Pretoria, South Africa - CapeBio TM Technologies, Centurion, South Africa
π Study the paper
π²Channel: @Bioinformatics
#review #machine_learning #cancer
πJournal: BMC Bioinformatics (I.F.=3)
π Publish year: 2023
π§βπ»Authors: Mpho Mokoatle, Vukosi Marivate, Darlington Mapiye, Riana Bornman & Vanessa. M. Hayes
π’Universities: University of Pretoria, South Africa - CapeBio TM Technologies, Centurion, South Africa
π Study the paper
π²Channel: @Bioinformatics
#review #machine_learning #cancer
π1
π Machine learning and artificial intelligence in neuroscience: A primer for researchers
πJournal: Brain, Behavior, and Immunity (I.F.=15.1)
π Publish year: 2024
π§βπ»Authors: Fakhirah Badrulhisham, Esther Pogatzki-Zahn, Daniel Segelcke, Tamas Spisak, Jan Vollert
π’Universities:
- Royal Devon and Exeter Hospital NHS Trust, Exeter, United Kingdom
- Department of Anaesthesiology, University Hospital Muenster, Germany
- Department of Clinical and Biomedical Sciences, University of Exeter, Exeter, United Kingdom
π Study the paper
π²Channel: @Bioinformatics
#review #ml #ai #neuroscience
πJournal: Brain, Behavior, and Immunity (I.F.=15.1)
π Publish year: 2024
π§βπ»Authors: Fakhirah Badrulhisham, Esther Pogatzki-Zahn, Daniel Segelcke, Tamas Spisak, Jan Vollert
π’Universities:
- Royal Devon and Exeter Hospital NHS Trust, Exeter, United Kingdom
- Department of Anaesthesiology, University Hospital Muenster, Germany
- Department of Clinical and Biomedical Sciences, University of Exeter, Exeter, United Kingdom
π Study the paper
π²Channel: @Bioinformatics
#review #ml #ai #neuroscience
π4β€1
π Cardioinformatics: the nexus of bioinformatics and precision cardiology
π Journal: Briefings in Bioinformatics (I.F.=9.5)
π Publish year: 2020
π§βπ»Authors: Bohdan B Khomtchouk, Diem-Trang Tran, Kasra A Vand, Matthew Might, Or Gozani, Themistocles L Assimes
π’Universities: Stanford University, USA - University of Alabama at Birmingham, USA - Quiltomics, Palo Alto, CA, USA
π Study the paper
π²Channel: @Bioinformatics
#review #cardiology #precision
π Journal: Briefings in Bioinformatics (I.F.=9.5)
π Publish year: 2020
π§βπ»Authors: Bohdan B Khomtchouk, Diem-Trang Tran, Kasra A Vand, Matthew Might, Or Gozani, Themistocles L Assimes
π’Universities: Stanford University, USA - University of Alabama at Birmingham, USA - Quiltomics, Palo Alto, CA, USA
π Study the paper
π²Channel: @Bioinformatics
#review #cardiology #precision
π4
π¨βπ« Last 2 days to Register - for One month International Bioinformatics Workshop by Decode Life.
π₯ Data Science and Machine learning - with Python, 8th Edition 2024 π₯
π Duration: 10 February - 7 March, 2024
βοΈ Registration Link
https://decodelife.co.in
π² Fees: Rupees 1200 for Indian Participants /USD 25 for international Participants
π₯Key Features:
β«οΈ22 sessions with approximately 35 hrs of learning
β«οΈE- Certificate of Participation
βΉοΈ Recording & material will be shared immediately after sessions
βFrequently asked questions
https://decodelife.co.in/faq
π Connect with us for meaningful networking - https://www.linkedin.com/company/decode-life
π»Please subscribe-
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Decodelife discord server - https://discord.gg/8B9CXCZs
π²Channel: @Bioinformatics
π₯ Data Science and Machine learning - with Python, 8th Edition 2024 π₯
π Duration: 10 February - 7 March, 2024
βοΈ Registration Link
https://decodelife.co.in
π² Fees: Rupees 1200 for Indian Participants /USD 25 for international Participants
π₯Key Features:
β«οΈ22 sessions with approximately 35 hrs of learning
β«οΈE- Certificate of Participation
βΉοΈ Recording & material will be shared immediately after sessions
βFrequently asked questions
https://decodelife.co.in/faq
π Connect with us for meaningful networking - https://www.linkedin.com/company/decode-life
π»Please subscribe-
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π²Channel: @Bioinformatics
π6β€2